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CLC Free Workbench

CLC Free Workbench creates a software environment enabling users to make
a large number of bioinformatics analyses, combined with smooth data
management, and excellent graphical viewing and output options.

Some of the many bioinformatics analyses are:
? Interactive restriction site analysis
? Creating and editing alignments
? Phylogenetics
? Integrated GenBank searches
? Advanced DNA to Protein translation


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Here is a great web site that lists many spectacular freeware programs.
http://www.all4you.dk/FreewareWorld/